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Citation
Magee, John (2024). A Prospective Database of Infants With Cholestasis (PROBE) (Version 5) [Dataset] NIDDK Central Repository. https://doi.org/10.58020/vwfs-jq54
Data Availability Statement
Data from the A Prospective Database of Infants With Cholestasis (PROBE) [(Version 5) https://doi.org/10.58020/vwfs-jq54] reported here are available for request at the NIDDK Central Repository (NIDDK-CR) website, Resources for Research (R4R), https://repository.niddk.nih.gov/.
Acknowledgement Statement
The PROBE study was conducted by the study investigators and supported by the National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK). The resources from the PROBE (https://doi.org/10.58020/vwfs-jq54) study reported here were supplied by NIDDK Central Repository (NIDDK-CR) and are available for request at https://repository.niddk.nih.gov. This manuscript was not prepared under the auspices of the PROBE study and does not necessarily reflect the opinions or views of the PROBE study, NIDDK-CR, or NIDDK.
Data Package Version
Version 5 (Updated on: Jul 17, 2024)
Resource Availability
  • Data Available for Request
  • Specimens Require Collaboration with Parent Study
Publications
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General Description

This is a multi-center project to establish a prospective database of clinical information and a repository of blood and tissue samples from children with diagnoses of neonatal liver diseases, such as biliary atresia and neonatal hepatitis in order to perform research in these liver problems. Children were screened and enrolled at presentation at the participating pediatric liver sites. Participants diagnosed with biliary atresia were followed intensively for the first year, at 18 months of age, then annually up to 20 years of age, liver transplantation, or resolution of the underlying liver disease. Other subjects diagnosed with cholestasis were followed on the same schedule; if there was complete (clinical and biochemical) resolution of their underlying liver disease off all therapy, there was one follow up visit within one year (preferably scheduled at the time of the next planned follow up visit or at 12 months of age, whichever was later) for data collection and to obtain blood samples. The development of a serum and tissue bank of specimens from children with various neonatal cholestatic disorders are for use by future investigations into the etiology and pathogenesis of hepatobiliary injury in the infant.

The data package available for request includes analysis datasets from multiple publications including combined data from the BASIC, LOGIC, and START studies.

Objectives

Establish a database of clinical information and collect samples of blood, DNA, urine, and liver tissue for research purposes.

Eligibility Criteria

Inclusion Criteria:

  • Infant's age less than or equal to 180 days at initial presentation at the ChiLDReN clinical site.
  • Diagnosis of cholestasis defined by serum direct or conjugated bilirubin greater than 20% of total and greater than or equal to 2 mg/dL.
  • The subject's parent(s)/guardian(s) willing to provide informed written consent.
Exclusion Criteria:
  • Acute liver failure.
  • Previous hepatobiliary surgery with dissection or excision of biliary tissue.
  • Diagnoses of bacterial or fungal sepsis (except where associated with metabolic liver disease)
  • Diagnoses of hypoxia, shock or ischemic hepatopathy within the past two weeks (If the cholestasis persists beyond two weeks of the initiating event, the infant can be enrolled).
  • Diagnosis of any malignancy.
  • Presence of any primary hemolytic disease (except when diagnosed with biliary atresia or another cholestatic disease being studied by ChiLDREN).
  • Diagnosis of any drug or Total parenteral nutrition (TPN)-associated cholestasis (except when diagnosed with biliary atresia or another cholestatic disease being studied by ChiLDREN).
  • Diagnosis with Extracorporeal membrane oxygenation (ECMO)-associated cholestasis.
  • Birth weight less than 1500g (except when diagnosed with biliary atresia).
Outcome

This study is ongoing.

Research Area

Liver Disease, Digestive Diseases

Study Type

Observational

Study Start Date

2004-04

Study End Date

2029-05

Condition

Cholestasis, Biliary Atresia, Bile Duct Disorder

Keywords

Hepatobiliary, billary atresia, cholestasis, extracorporeal membrane oxygenation, billary tissie, neonatal hepatitis

NIDDK Division

Division of Digestive Diseases and Nutrition

875
Participants

Target Population
Children, Transplant Patients
Location statistics is not available for this study

Public Documents Table
Document Name
Description
Document Type
File Format
Compliance
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Non-Public Documents (15)
Non-Public Documents Table
Document Name
Description
Document Type
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Datasets (12)
Datasets Table
Dataset Name
Description
# of Records
# of Variables
File Format(s)
Specimens (149,423)
Specimens Table
Specimen
Count
BILE5
Bile Duct4342
Bile-GB Aspirate30
Biliary Remnant1083
Cells749
Cinci Core Bx1
DNA16235
EBV Transformed Cell Lines5911
Gallbladder4302
Liver Biopsy10
Liver Explant10
Liver Perc Bx520
Liver Tissue24436
Liver Wedge Bx562
Lymph Node361
Lymphocytes668
Mitochondrial RNA1897
Percutaneous Bx800
Plasma34864
Protein1390
R-RBC8
RNA1385
Serum32385
Urine9875
Wedge Bx7352